Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq224 156 4e-36 seq458 78.8 9e-13 >seq224 Length=2112 Score = 156 bits (172), Expect = 4e-36 Identities = 91/94 (97%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 407 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 466 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||||||| ||||| |||| ||||| Sbjct 467 TGACGCCTGCCCGGTGCTGGAAGATTAAATGATG 500 >seq458 Length=1041 Score = 78.8 bits (86), Expect = 9e-13 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| ||||||||||| | |||||||| |||| || |||||| |||||||| Sbjct 868 AGGCCCAAGCGACTGTTTACCACAAACACAGGTGCCTGCTAAAGCGAAAGCTGACGTATA 927 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||| |||||||||||| |||||||||| Sbjct 928 GGTGCTGACACCTGCCCGGTGCTGGAAGGTTAA 960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476797491883