Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq209 484 2e-134 >seq209 Length=3312 Score = 484 bits (536), Expect = 2e-134 Identities = 408/497 (82%), Gaps = 3/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct 2729 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGAT 2670 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||| ||||||||| |||||||||||||||||||| ||||||||| | || || Sbjct 2669 GTGGATTAATTCGATGCAACGCGAAGAACCTTACCTGCTCTTGACATGTACGGAAGACTA 2610 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||||| | |||| |||||||| || | ||||||| ||||||| ||||||||| Sbjct 2609 CAGAGAT-GTGGTTGTGCCTTCGGGA-ACCGTAACACAGGTGCTGCATGGCTGTCGTCAG 2552 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||| Sbjct 2551 CTCGTGTCGTGAGATGTTGTCTTAAGTGACGCAACGAGCGCAACCCTTGTCACTAGTTGC 2492 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||||||||||||||||| || ||||||||| | || ||||||||||||||||| Sbjct 2491 CATCATTAAGTTGGGCACTTTAGTGAGACTGCCGGAGCTAATCCGGAGGAAGGTGGGGAT 2432 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT-A 359 |||||||| || ||||| ||||||||| ||||| ||||||| |||||||| | | | Sbjct 2431 GACGTCAAGTCCTCATGGCCCTTATGAGCAGGGCTTCACACGTCATACAATGGTAAGTAA 2372 Query 360 CAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATT 419 || |||| |||||| | |||| || ||||||||||||||| | || ||| ||||| Sbjct 2371 CAGAGGGAAGCGAAGCGGCGACGTGGAGCAAATCCCATAAACCTTATCGTAGTCCGGATC 2312 Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479 ||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct 2311 GTAGTCTGCAACTCGACTACGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGCCG 2252 Query 480 CGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 2251 CGGTGAATACGTTCCCG 2235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503991833280