Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq209 194 1e-47 >seq209 Length=3312 Score = 194 bits (214), Expect = 1e-47 Identities = 138/157 (88%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||||| ||||||||||||||| ||| ||||||| ||||| | |||| Sbjct 2296 TCGAGTTGCAGACTACGATCCGGACTACGATAAGGTTTATGGGATTTGCTCCACGTCGCC 2355 Query 61 GGTTGGCGGCCCTCTGT-ATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | || || |||||||| | |||||||||||||||||||||||||| | |||||||||| Sbjct 2356 GCTTCGCTTCCCTCTGTTACTTACCATTGTATGACGTGTGAAGCCCTGCTCATAAGGGCC 2415 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156 |||||||||||||||||||||||||||||||||| || Sbjct 2416 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGATT 2452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415997811710