Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq224 183 2e-44 >seq224 Length=2112 Score = 183 bits (202), Expect = 2e-44 Identities = 124/139 (89%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 1067 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTG 1008 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||||| |||||| | |||| ||||||| ||||||| |||||||||||||||| | Sbjct 1007 CTTTCGCACCTGCTCGACTTGTCAGTCTCGCAGTCAAGCAACCTTTTGCCATTGCACTTT 948 Query 121 CACTACGATTTCCGACCGT 139 | ||||||||||||||| Sbjct 947 CCTCACGATTTCCGACCGT 929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351998208100