Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq344 82.4 1e-13 >seq344 Length=1229 Score = 82.4 bits (90), Expect = 1e-13 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 148 TTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAG 207 |||||||| || ||||||||||||||||| || ||||||||| | ||||| || || Sbjct 1227 TTTTTACCAGCTTTTTGCTTCTCAAGCAGTTTTTTCTTACGGCTGATATCACCACCATAA 1168 Query 208 CATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCG 267 || || ||||| || || || | | || || || | || ||||| || ||| | Sbjct 1167 CACTTAGCCAGGACATTTTTACGCATTGCTTTAACTGTTTCGCGGGCAATAATATGCGCA 1108 Query 268 CCAATGGCGGCCTGGATCGC 287 ||||| || ||||| ||||| Sbjct 1107 CCAATCGCAGCCTGAATCGC 1088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838395447488