Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq209 181 3e-43 >seq209 Length=3312 Score = 181 bits (200), Expect = 3e-43 Identities = 118/130 (91%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 3 ACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCA 62 |||||||||||| |||||||||||||| |||||||| | |||| |||||| |||| |||| Sbjct 3181 ACTTTACAACCCTAAGGCCTTCTTCATTCACGCGGCGTTGCTGGATCAGGGTTGCCCCCA 3240 Query 63 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 122 |||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 3241 TTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 3300 Query 123 GTGGCTGGTC 132 ||||||| || Sbjct 3301 GTGGCTGATC 3310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222393362368