Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq209 338 2e-90 >seq209 Length=3312 Score = 338 bits (374), Expect = 2e-90 Identities = 323/410 (79%), Gaps = 10/410 (2%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| ||| || |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 3129 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 3070 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||| |||||||||||||||||||| ||||| ||| || | ||||| ||| || Sbjct 3069 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGATATGTAAGTTAGAAGT 3010 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT--GCAGGA 178 |||| | ||||||||| || | |||||| | ||||| ||||||| | || Sbjct 3009 GAAATCCCCGGGCTCAACCTGGGAATGGCTTTTAAGACTGCGTATCTAGAGTTTGTCAGA 2950 Query 179 GGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGT 238 |||| |||||||||| |||||||| |||||||||||||| ||| |||||||||||| | Sbjct 2949 GGGGG--GTGGAATTCCAAGTGTAGCAGTGAAATGCGTAGAGATTTGGAGGAACACCAAT 2892 Query 239 GGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAAC 298 ||||||||| | |||| | ||||||| || | || |||||||||||| ||||||| Sbjct 2891 GGCGAAGGCAACCCCCTGGGATAAAACTGACGCTCATGCACGAAAGCGTGGGTAGCAAAC 2832 Query 299 AGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT 358 |||||||||||||||||||||||||||| ||||||||| |||| | ||| |||| ||| Sbjct 2831 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCTACTTGCTGTTGGGG-GCA- 2774 Query 359 AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | || || ||| ||||| | ||||| || ||||||||||| Sbjct 2773 ----ACCTTAGTAGCGAAGCTAACGCGAGAAGTAGACCGCCTGGGGAGTA 2728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203193466624