Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20sexaurelia_20[genbank_20GCA_5F000733375.1_202014-07-25] 543 sequences; 68,016,588 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq209 147 5e-33 >seq209 Length=3312 Score = 147 bits (162), Expect = 5e-33 Identities = 170/225 (76%), Gaps = 7/225 (3%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACA--AGCTCCCACAC 58 ||||||||||||| ||||||||| ||||||||| | |||||| || |||| Sbjct 3089 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCAGGTACCGTCAGCAGCTTGTGATA 3148 Query 59 GTGG---AAGG-TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | | ||| |||| |||||| | ||||||| ||||||| || || ||||| || | Sbjct 3149 TTAGCACAAGCCTTTTCTTCCCTGACAAAAGAACTTTACAACCCTAAGG-CCTTCTTCAT 3207 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 |||||| | | ||||| |||| | | |||||| |||| ||||| |||||||||||| Sbjct 3208 TCACGCGGCGTTGCTGGATCAGGGTTGCCCCCATTGTCCAAAATTCCCCACTGCTGCCTC 3267 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTT 219 |||||||||| ||| |||||||||||| ||| ||||| || ||| Sbjct 3268 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCTT 3312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068794196416