Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6853 268 4e-69 seq23652 156 2e-35 seq23651 152 2e-34 >seq6853 Length=7513 Score = 268 bits (296), Expect = 4e-69 Identities = 230/279 (82%), Gaps = 9/279 (3%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AAAC 466 ||||||||| |||||||||||||||||||||| | ||||||||||| |||| |||| Sbjct 2931 CCCGTCTTGAAACACGGACCAAGGAGTCTAACTTATATGCGAGTGTGATGGTGGAGAAAC 2872 Query 467 CCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGAT 526 | | ||||||||||| || | || || || | | | ||| |||||||||| Sbjct 2871 CATTACGCGTAATGAAGGTAAGCGA---TGCCAAGCGC--AAGCAGCAGCATCGACCGAC 2817 Query 527 CCTGATGTCTTCGG--ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 | |||| || ||| | | |||||||| ||||||| |||| |||||||||||||||| Sbjct 2816 CATGATC-CTCCGGTGAAAGGTTTGAGTACGAGCATATATGTTAGGACCCGAAAGATGGT 2758 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 ||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 2757 GAACTATGCCTGAGTAGGGTGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGGTTCT 2698 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | |||||||||||||||||||| |||||||||||||||| Sbjct 2697 GACGTGCAAATCGATCGTCAAACTTGGGTATAGGGGCGA 2659 Score = 149 bits (164), Expect = 3e-33 Identities = 136/168 (81%), Gaps = 9/168 (5%) Strand=Plus/Minus Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAA 92 |||| |||||||| ||||||| | | |||||| |||| |||||| |||| ||||||||| Sbjct 3338 CTTC-ACGAGTCGGGTTGTTTTGTATTGCAGCCCTAAGTGGGAGATAAACTTCTTCTAAG 3280 Query 93 GCTAAATAT---TGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149 ||||||||| ||| || |||||||||| ||||||| |||| ||||||||||||| Sbjct 3279 GCTAAATATATATGG---GAAACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAG 3223 Query 150 CACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 |||||| ||||||||| |||| || |||||| ||||| | ||||| Sbjct 3222 AACTTTGAAAAGAGAGTCAAAA--GACTTGAAATCGTTGAGAAGGAAG 3177 >seq23652 Length=520 Score = 156 bits (172), Expect = 2e-35 Identities = 115/134 (86%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 385 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 444 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||| | ||||||||||||| ||||||| |||| |||||| Sbjct 445 TCCATCTAAAGCTAAATATGGAAGAGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGA 504 Query 143 TGAAAAGCACTTTG 156 ||||||| |||||| Sbjct 505 TGAAAAGAACTTTG 518 >seq23651 Length=1360 Score = 152 bits (168), Expect = 2e-34 Identities = 109/124 (88%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | |||||| |||||||||||||||||| | ||||||| |||||||||| ||||||| Sbjct 1235 TTCAAAGAGTCGGGTTGTTTGGGAATGCAGCCCAAAATGGGTGGTAAATTTCATCTAAAG 1294 Query 94 CTAAATATT-GGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 ||||||||| ||| |||||||||||||| ||||||| |||| ||||||||||||| || Sbjct 1295 CTAAATATTGGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAAC 1354 Query 153 TTTG 156 |||| Sbjct 1355 TTTG 1358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079455363050