Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq10356 165 6e-36 seq6480 149 5e-31 >seq10356 Length=2916 Score = 165 bits (182), Expect = 6e-36 Identities = 503/775 (65%), Gaps = 2/775 (0%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||| || | || || || | || || | ||| || ||||| | || ||||||| ||| Sbjct 1633 ACATACCTTGGTAGTGCTACTGAAGCCAAGTTACAAACAGCCACTTCATCAGGAGATGTA 1574 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 || || |||||||| || |||| ||| | ||| || |||||||| || | ||| Sbjct 1573 TATTCAACAATTTCAGTACACAAATTTGAACTTTTTATTGTTCCCAAATTTTGCTAGTTA 1514 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 ||| | |||||| | ||||||||| | ||| || || || || ||||| | ||| ||| Sbjct 1513 GACTTTCTATTGCACGTATCCTTGTAAAGCATATAGGGTGTACCAGTCTCTAGTTGTGAC 1454 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCG 66231 || || || | ||| || | ||| | | || | | | ||| ||||||| Sbjct 1453 TCTATAATCTATTACCATAGCCATCTTGCTTATATGGT-CTTTCTGCCTCTACCTTGTTC 1395 Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACA 66291 ||| || || |||||| | || || || ||||| || || | ||| || Sbjct 1394 TTCATAGCTTTGGTAGAGCTTGTCAAATTCCTCTCCCCAGGTATCACTCAATCCTGGGCA 1335 Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351 || | || ||||| || | ||| | ||| || |||||| | | ||| || ||||| Sbjct 1334 CTCATTAGGGCACATTAGAGTCCAGTGTTCATTCTTTTCTACTCTTCTCATGAAAAGATC 1275 Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTT 66411 || ||||||||||| ||||| | ||| || |||| | |||||| | || || || || Sbjct 1274 TGGGATCCAGAGGGCATAGAACAAATCACGAGCTCTGTTCTCCTCCTTACCATGGTTCTT 1215 Query 66412 GCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGA 66471 | ||| | | ||| || ||||||| ||||||||||| || | || | || || | Sbjct 1214 CCTCAACTATAAGAAGTCGTAGATGTCCGCATGCCATGGCTCAACATAAACAGCAAAGGC 1155 Query 66472 GCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAA 66531 || | | ||| |||||||||| |||||| ||||| || | || || || || Sbjct 1154 TCCTTTTCTTTTCCCGCCACCTTAGTCGACATAGCGCGCAGTGTCATTAAACACTTTCAG 1095 Query 66532 CATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCG 66591 | || || || || | | | || || ||||| || ||| | || || Sbjct 1094 AAGAGGAACTAGTCCTGTGGCATAACCGTTTGTGCCTCTAATATAGGAGTCAGTCGCACG 1035 Query 66592 TATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC 66651 ||| | ||| | |||||||||||| || | ||||| || | ||| | Sbjct 1034 TATGTTACTAACTGATACACCAATACCACCAGCGGCTTTCGAAATAACCGCAATTTATTT 975 Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 || ||| |||||||| |||| || || | || | || || ||| |||| ||||| Sbjct 974 CAGTGTTTCAAATATGCCTTCAACTGAATCTTCTTTAGTCGTAAGTAGGAAGCAAGAACT 915 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAG 66766 | || ||||| ||||| | | |||||| ||||| ||||| || |||||| Sbjct 914 CATTTATGGTTTTGGTGTACCAGAATTGAAGAGAGTGGGAGTAGCATGAGTAAAG 860 >seq6480 Length=2904 Score = 149 bits (164), Expect = 5e-31 Identities = 211/297 (71%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| |||||||| | ||| | || |||| ||||| | ||||| ||| ||||| | Sbjct 1298 CATAAAGAGATCAGGAACCCACAAAGCAAAGAAAAGATCTCTTGCTCTTTGTTCCTCTTT 1239 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 ||||||||||| || | | ||||| ||||||||||| || ||||||||||| | || Sbjct 1238 ACCGTGATTTTTACGGAGCTATAGGAAATCAAAGATGTCAGCGTGCCATGGTTCTAAATA 1179 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 ||||||||| || || | | || || |||||||| || || || || || | || Sbjct 1178 GATGGCGAAAGATCCTTTTCTCTTACCACCACCTTGATCTACATAACGGGCAGTTTCATT 1119 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579 |||||| | || ||| ||||| || || ||||| | || || || || | |||| ||| Sbjct 1118 GAAGACTCTCAGCATGGGTACAAGGCCATTAGAATGACCGTTTGTTCCCTTGATGTAGGA 1059 Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 ||| || | || | |||||| || |||| || || || |||| ||||| Sbjct 1058 TCCAGTAGCTCTAATGTTATGAACAGCAAGTCCAACTCCTCCAGCACTCTTAGAGAT 1002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397444971464240