Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq23162 168 8e-37 seq23963 111 2e-19 >seq23162 Length=1931 Score = 168 bits (186), Expect = 8e-37 Identities = 180/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 189353 TTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGCAG 189412 |||| ||||| || ||||| || || || ||||| || ||||||||| | || || |||| Sbjct 1477 TTGTATTCCAGGCCGAGCATAATATTCTTATGCATCCGTTCCACATGTTAGGTGTTGCAG 1536 Query 189413 GTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCTTCACTGG 189472 |||| || || ||||| ||||| || |||||||||||||| || ||||| || || | Sbjct 1537 GTGTATTTGGCGGTTCGCTGTTTTCAGCAATGCATGGTTCGCTAGTTACTTCATCTTTAA 1596 Query 189473 TTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGAAG 189532 |||| ||||| ||||||| ||| || || |||||| || || |||||||||| Sbjct 1597 TTCGCGAAACAACTGAAAACGAATCTGCTAATGCGGGTTACCGTTTCGGCCAAGAAGAAG 1656 Query 189533 AAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCTTCCAATATGC 189590 | || || || || || || ||||| || || || |||||| | ||||||||||| || Sbjct 1657 AGACTTATAATATTGTAGCAGCTCACGGTTACTTTGGTCGTTTAATCTTCCAATACGC 1714 >seq23963 Length=704 Score = 111 bits (122), Expect = 2e-19 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 189701 TCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTGAACACATGGGCAGACG 189760 |||||||||| ||||| || | ||| |||||| ||||| | || |||||||| ||| Sbjct 425 TCAACTTCAACCAATCAGTTGTAGATTCTCAAGGCCGTGTATTAAATACATGGGCTGACA 484 Query 189761 TTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAACTTCC 189820 || ||||||||||| | ||||||||||| ||||| || |||||||| || ||||||| Sbjct 485 TTATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAACGTAACGCACATAACTTCC 544 Query 189821 CTCTTGATCTGGCAGCAGC 189839 | || ||| | || |||| Sbjct 545 CACTAGATTTAGCTTCAGC 563 Score = 86.0 bits (94), Expect = 8e-12 Identities = 90/117 (77%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 189595 TTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGGCCAGTCGTGGGTATCTGG 189654 ||||||||| ||||||| | ||||||||| | ||||| |||||||| || |||||||| Sbjct 46 TTCAACAACAGCCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTTGTATGTATCTGG 105 Query 189655 TTTACCGCCCTCGGCGTCAGCACCATGGCATTCAACCTCAATGGGTTCAACTTCAAT 189711 ||||| || | || | || ||||| |||||||| || ||||| || || ||| Sbjct 106 TTTACAGCTTTAGGTTTATCAACAATGGCTTTCAACCTTAACGGGTT-AATTTTAAT 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633878750934000