Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2990 89.7 1e-15 >seq2990 Length=2017 Score = 89.7 bits (98), Expect = 1e-15 Identities = 81/101 (80%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGA-ATGCCTAGTAAGCG 287 ||||| |||||||||| | ||||||||| | || |||||||| ||||||||||||| Sbjct 27 TCGTGATGGGGATAGATTAATGCAATTATAAATGTTGAACGAGGACATGCCTAGTAAGCA 86 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||||| | | ||| ||||||||||||||||||| Sbjct 87 TGATTCATCAGATTGTGCTGACTACGTCCCTGCCCTTTGTA 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947129158912