Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F900044335.1_202016-02-18] 478 sequences; 18,811,223 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 1e-14 seq11 80.6 1e-13 seq10 80.6 1e-13 >seq12 Length=816096 Score = 84.2 bits (92), Expect = 1e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 27612 CCTAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 27562 >seq11 Length=923120 Score = 80.6 bits (88), Expect = 1e-13 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 67 TAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 862390 TAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 862342 >seq10 Length=919979 Score = 80.6 bits (88), Expect = 1e-13 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 67 TAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 770571 TAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 770523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278398752420