Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F900044335.1_202016-02-18] 478 sequences; 18,811,223 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq190 170 4e-40 seq284 95.1 3e-17 >seq190 Length=4456 Score = 170 bits (188), Expect = 4e-40 Identities = 259/364 (71%), Gaps = 16/364 (4%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | |||||| || | || || |||||| || ||||| Sbjct 3498 GCATCTTCACAGATAATTTTATTTCATTAAGATTTTTTTTAAGACAGCATTTAAGTCGTT 3439 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3438 ACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTA 3379 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATT----GCTCTAACAG 182 ||| ||| ||||||||||||| ||||| | | | | ||| | ||| | Sbjct 3378 TAGATACAGCCGCCGTTTACTATAGCTTATATATA-TATTATAATTTTAAATTATAA-AT 3321 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 || || || | ||||| |||||| |||| |||||||| |||| ||| ||| Sbjct 3320 ATTATTTTTACATAATAGCACTGGGCAGATGTCAATCTTTATACATCATCTTTCGATTTA 3261 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCA--T 300 ||| | | |||||||||| ||||||||||||| ||| | || | ||| | Sbjct 3260 GCAAAGATTTGTGTTTTTGTTAAACAGTCGCTT----AAATTTTTTG----TTTTCAACT 3209 Query 301 AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGT 360 | | | | | | ||||||||||||||||| | | | ||||||||||||||||| || | | Sbjct 3208 AAATAAGTATCTCTTCTCCCTAAGTTACGAGATAAATTTGCCGAGTTCCTTAAAAAAAAT 3149 Query 361 TCTC 364 | || Sbjct 3148 TATC 3145 >seq284 Length=5998 Score = 95.1 bits (104), Expect = 3e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| || ||| ||| || |||| |||||||||||||||||| |||||||||| Sbjct 102 AAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAG 161 Query 119 GACCGTTATAGTTACGGCCGCCGTTTA 145 ||||||| | ||| ||||||||||| Sbjct 162 GACCGTTTATGATACAGCCGCCGTTTA 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062394921728