Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq689 111 3e-22 seq525 96.9 6e-18 >seq689 Length=8468 Score = 111 bits (122), Expect = 3e-22 Identities = 186/267 (70%), Gaps = 29/267 (11%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC--------------CTTTGCTCGAAT 120 ||||||||| |||||||||||||||||||| | || || | |||| Sbjct 841 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAAACAGTTAAAACAGTTTCTGTGTTTGAAT 900 Query 121 ACATTAGCATGGAATAATAGAATAGGAC--GTGCG------GTTCTATTTTGTTGGTTTC 172 || |||||||||||| | ||| | || || | ||||| |||| || ||| Sbjct 901 ACTACAGCATGGAATAACAAAATTGAACAAGTCAGAATTTTGTTCTTTTTTCTTATTTT- 959 Query 173 TAGGACCGCCGTAATGATTAATAGGGATAG-TCGGGGGTGTCAGTATTCAATTGTCAGAG 231 || | || | |||||||||| ||| | ||||| | ||||||| |||||||| Sbjct 960 --GG--CTTAGTTACGATTAATAGGAGTAGCTTGGGGGCATTTGTATTCAGATGTCAGAG 1015 Query 232 GTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTT 291 ||||||||||| ||||| || |||| | | ||||||||||| || || | || || Sbjct 1016 GTGAAATTCTTAGATTTTCTGGAGACAAGCAACTGCGAAAGCATTTGCCTAAAATACTTC 1075 Query 292 CATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||| |||||||||||| ||| Sbjct 1076 CATTAATCA-AGAACGAAAGTTAAGGG 1101 >seq525 Length=40717 Score = 96.9 bits (106), Expect = 6e-18 Identities = 101/130 (78%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||| || ||||| | |||||||| | |||||||||||||| ||||| Sbjct 2040 ATTAATAGGAGTATCGGGGGGCATTAGTATTCAGAAGGAAGAGGTGAAATTCTAAGATTT 2099 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 ||| ||||||| |||||||| || || |||| ||| ||||||||||||| |||||| Sbjct 2100 TCTGAGGACTAACGACTGCGAATGCATTTGCCAATGATATTTTCATTAATCA-AGAACGA 2158 Query 309 AAGTT-AGGG 317 | ||| |||| Sbjct 2159 AGGTTGAGGG 2168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915191278144