Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq953 143 6e-32 seq952 95.1 3e-17 >seq953 Length=28948 Score = 143 bits (158), Expect = 6e-32 Identities = 218/308 (71%), Gaps = 8/308 (3%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| | Sbjct 25065 AAGTCGTTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTG 25124 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTA-AGTTCACTGCTTCGATTGCTCT 177 ||||||||||| ||| ||||||||||||| ||||| | | | | ||| | Sbjct 25125 GACCGTTATAGATACAGCCGCCGTTTACTATAGCTTATATATATATTATAATATTAAATT 25184 Query 178 A-ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236 | | | || || || | ||||| |||||| |||| |||||||| | || | Sbjct 25185 ACATATATTATTTTTACATAATAGCACTGGGCAGATGTCAATCTTTATACATCATTTTTC 25244 Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTG 296 | |||||| | | |||||||||| ||||||||||||| |||| | | | | Sbjct 25245 AATTTAGCAAAGATTTGTGTTTTTGTTAAACAGTCGCTTAAATTTATTATTTTCAAC--- 25301 Query 297 TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAA 356 || | | | | | || |||||||||||| | | | |||||| |||||||||| || Sbjct 25302 ---TAAATAAGTATCTTTTATCCCTAAGTTACAAGATAAATTTGCCTAGTTCCTTAAAAA 25358 Query 357 TAGTTCTC 364 | || || Sbjct 25359 AAATTATC 25366 >seq952 Length=6302 Score = 95.1 bits (104), Expect = 3e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| || ||| ||| || |||| |||||||||||||||||| |||||||||| Sbjct 434 AAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAG 493 Query 119 GACCGTTATAGTTACGGCCGCCGTTTA 145 ||||||| | ||| ||||||||||| Sbjct 494 GACCGTTTACGATACAGCCGCCGTTTA 520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062389875328