Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20adami_20[genbank_20GCA_5F900095565.1_202016- 11-23] 661 sequences; 19,350,400 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq193 84.2 1e-14 seq413 80.6 1e-13 seq412 80.6 1e-13 >seq193 Length=1054 Score = 84.2 bits (92), Expect = 1e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 105 CCTAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 155 >seq413 Length=836 Score = 80.6 bits (88), Expect = 1e-13 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 67 TAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 182 TAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 230 >seq412 Length=789 Score = 80.6 bits (88), Expect = 1e-13 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 67 TAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 546 TAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278398274790