Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20adami_20[genbank_20GCA_5F900095565.1_202016- 11-23] 661 sequences; 19,350,400 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq415 73.4 1e-10 >seq415 Length=26411 Score = 73.4 bits (80), Expect = 1e-10 Identities = 97/135 (72%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 206 GTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAAC 265 ||||||||| ||| | | ||| |||| ||||||||| | || | |||| Sbjct 1269 GTGAAATGCAATAATACAAAAAAGAATACCAAAGGCGAAGGCATAATACTATATAATAAC 1210 Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 ||||||| | ||||||| || |||||| ||||||||||||||| |||||| || Sbjct 1209 TGACACTTATAAACGAAAGCTAAGGTAGCAAATAGGATTAGATACCCTAGTAGTCTTAGC 1150 Query 326 CGTAAACGATGAATA 340 |||||| ||||||| Sbjct 1149 TGTAAACTATGAATA 1135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203192046848