Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq8 138 2e-30 seq10 134 2e-29 >seq8 Length=1026601 Score = 138 bits (152), Expect = 2e-30 Identities = 190/267 (71%), Gaps = 38/267 (14%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||| | | | || ||||| || |||||||||| ||| | Sbjct 909164 GTACAAAGGGCAGGGACGTAGTCAGCACAATCT-GATGAATCATGCTTACTAGGCATT-C 909107 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG--ATGAAATTTCAAAGAT 118 |||||| |||| || ||||||||| |||||||||||||||| ||| | | |||||| Sbjct 909106 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCCATCACGATATGTACTGATAAAGAT 909047 Query 119 TACCCGGACCTGTC------GGCCAAG-----------------------GTGA---TAG 146 |||| || | || || ||| || | ||| Sbjct 909046 TACCTACACTTTTCAGTGGAGGAAAAGTACGCAATGCGCAAGCGCAAAACGTAATTTTAG 908987 Query 147 --ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA 204 ||||||| | | ||||||||||| ||||||| ||| || ||||||||| ||||||| Sbjct 908986 TAACTCGTTATACATATCAGTGTAGCACGCGTGCAGCCTAGTTCATCTAAGGACATCACA 908927 Query 205 GACCTGTTATTGCCTCAAACTTCCGTG 231 |||||||| |||||| |||||||| || Sbjct 908926 GACCTGTTGTTGCCTTAAACTTCCTTG 908900 >seq10 Length=1594295 Score = 134 bits (148), Expect = 2e-29 Identities = 189/269 (70%), Gaps = 40/269 (15%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||| | | | || |||| ||| |||||||||| ||| | Sbjct 80467 GTACAAAGGGCAGGGACGTAGTCAGCACAATCTA-ATGAATCGTGCTTACTAGGCATT-C 80524 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG--ATGAAATTTCAAAGAT 118 |||||| |||| || ||||||||| |||||||||||||||| ||| | | |||||| Sbjct 80525 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCCATCACGATATGTATTGATAAAGAT 80584 Query 119 TACCCGGACCTGTC------GGCCAAG-GTGATA-------------------------- 145 |||| |||| || || ||| ||| | Sbjct 80585 TACCTACACCTTTCAGTGGAGGAAAAGTATGAAATGTACAGAAGCACAAATCATAATTTT 80644 Query 146 ---GACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCA 202 ||||||| | | ||||||||||| ||||||| ||| || ||||||||| ||||| Sbjct 80645 TGTAACTCGTTATACATATCAGTGTAGCACGCGTGCAGCCTAGTTCATCTAAGGACATCA 80704 Query 203 CAGACCTGTTATTGCCTCAAACTTCCGTG 231 |||||||||| |||||| |||||||| || Sbjct 80705 CAGACCTGTTGTTGCCTTAAACTTCCTTG 80733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998848970