Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq10 136 7e-30 seq8 131 3e-28 >seq10 Length=1594295 Score = 136 bits (150), Expect = 7e-30 Identities = 205/296 (69%), Gaps = 38/296 (13%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || || | || | | | |||||||| |||||| ||||||||||| Sbjct 80763 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 80704 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT---- 185 |||| ||||||||| || ||| ||||||| |||||||||| | |||||||| Sbjct 80703 GATGTCCTTAGATGAACTAGGCTGCACGCGTGCTACACTGATATGTATAACGAGTTACAA 80644 Query 186 -----------------------CATCAC---CTTGGCC------GGAAGGTCTGGGTAA 213 ||| | ||| || | ||||| | ||||| Sbjct 80643 AAATTATGATTTGTGCTTCTGTACATTTCATACTTTTCCTCCACTGAAAGGTGTAGGTAA 80584 Query 214 TCTTGTTAAACTC-TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGG 272 |||| | || | | ||||| |||||||||| |||||||||||| |||| ||||||| Sbjct 80583 TCTTTATCAATACATATCGTGATGGGGATAGATTATTGCAATTATTAATCTTGAACGAGG 80524 Query 273 AATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||| || |||| || | | ||| ||||||||||||||||||| Sbjct 80523 AATGCCTAGTAAGCACGATTCATTAGATTGTGCTGACTACGTCCCTGCCCTTTGTA 80468 >seq8 Length=1026601 Score = 131 bits (144), Expect = 3e-28 Identities = 203/294 (69%), Gaps = 36/294 (12%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || || | || | | | |||||||| |||||| ||||||||||| Sbjct 908870 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 908929 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC--- 186 |||| ||||||||| || ||| ||||||| |||||||||| | |||||||| Sbjct 908930 GATGTCCTTAGATGAACTAGGCTGCACGCGTGCTACACTGATATGTATAACGAGTTACTA 908989 Query 187 --ATCAC-----------------------CTTGGCC------GGAAGGTCTGGGTAATC 215 || || ||| || | || || | ||||||| Sbjct 908990 AAATTACGTTTTGCGCTTGCGCATTGCGTACTTTTCCTCCACTGAAAAGTGTAGGTAATC 909049 Query 216 TTGTTAAACTC-TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAA 274 || | | | | ||||| |||||||||| |||||||||||| |||| ||||||||| Sbjct 909050 TTTATCAGTACATATCGTGATGGGGATAGATTATTGCAATTATTAATCTTGAACGAGGAA 909109 Query 275 TGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||| | ||||||| | | ||| ||||||||||||||||||| Sbjct 909110 TGCCTAGTAAGCATGATTCATCAGATTGTGCTGACTACGTCCCTGCCCTTTGTA 909163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198503424