Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq24 84.2 1e-14 seq6 78.8 5e-13 >seq24 Length=358120 Score = 84.2 bits (92), Expect = 1e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 299 CCTAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 349 >seq6 Length=557456 Score = 78.8 bits (86), Expect = 5e-13 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 ||||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct 48355 CCTAGTCGGTATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 48405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399352720