Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20fragile_20[genbank_20GCA_5F000956335.1_202015-03-20] 248 sequences; 25,914,542 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq248 147 5e-33 >seq248 Length=35616 Score = 147 bits (162), Expect = 5e-33 Identities = 219/310 (71%), Gaps = 12/310 (4%) Strand=Plus/Minus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| | Sbjct 4212 AAGTCGTTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTG 4153 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTA 178 ||||||||||| ||| ||||||||||||| ||||| | | || | | | || Sbjct 4152 GACCGTTATAGATACAGCCGCCGTTTACTATAGCTTA--TATATATATTATAATTTTATA 4095 Query 179 ----ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT 234 | | || || || | ||||| |||||| |||| ||||| || | || Sbjct 4094 TTATATATATTATTTTTACATAATAGCACTGGGCAGATGTCAATCTTTATACTTCATTTT 4035 Query 235 GCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294 | | |||||| | | |||||||||| ||||||||||||| |||| | | | | Sbjct 4034 TCAATTTAGCAAAGATTTGTGTTTTTGTTAAACAGTCGCTTAAATTTATTATTTTCAAC- 3976 Query 295 TGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAAC 354 || | | | | | ||||||||||||||| | | | ||||||||||||||||| Sbjct 3975 -----TAAATAAGTATCTTTTCTCCCTAAGTTACAAGATAAATTTGCCGAGTTCCTTAAA 3921 Query 355 AATAGTTCTC 364 || | || || Sbjct 3920 AAAAATTATC 3911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062397365248