Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq20336 95.1 2e-17 >seq20336 Length=353 Score = 95.1 bits (104), Expect = 2e-17 Identities = 85/104 (82%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||| | | | | | |||| || |||||||||| | ||| Sbjct 287 GTACAAAGGGCAGGGACGTAGTCAGCACAATC-TAATGAATCATGCTTACTAGGCA-TTC 230 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT 104 |||||| |||| || ||||||||| ||||||||| | ||||| Sbjct 229 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCAGTTACGAT 186 Score = 86.0 bits (94), Expect = 9e-15 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 ||| ||| ||| |||| |||||| ||||||| ||| || |||||||| ||||||||| Sbjct 82 ACTTGTTATATATATCATTGTAGCACGCGTGCAGCCTAGTTTATCTAAGGACATCACAGA 23 Query 207 CCTGTTATTGCCTCAAACTTCC 228 |||||| |||||| |||||||| Sbjct 22 CCTGTTGTTGCCTTAAACTTCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751812367540