Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq15061 152 8e-35 seq20336 78.8 1e-12 >seq15061 Length=441 Score = 152 bits (168), Expect = 8e-35 Identities = 106/119 (89%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA-CTCCAC 199 |||| ||||||||||||| |||||||||||||||||||||||||||||||||| | ||| Sbjct 205 GCTAATTAGCAGGTTAAGATCTCGTTCGTTATCGGAATTAACCAGACAAATCATATTCAC 146 Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| |||||||||||| ||||| ||| ||||||||||||||||| |||||||| Sbjct 145 GAACTAAAAACGGCCATGCATCACCATCCAAGAAATCAAGAAAGAGCTATTAATCTGTC 87 >seq20336 Length=353 Score = 78.8 bits (86), Expect = 1e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||| ||||||| ||| || |||||||| ||||||||||||||| |||||| Sbjct 68 TCATTGTAGCACGCGTGCAGCCTAGTTTATCTAAGGACATCACAGACCTGTTGTTGCCTT 9 Query 76 AAACTTCC 83 |||||||| Sbjct 8 AAACTTCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796601189436