Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq8261 132 1e-28 >seq8261 Length=657 Score = 132 bits (146), Expect = 1e-28 Identities = 236/336 (70%), Gaps = 10/336 (3%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| | || ||||||||||||| |||||| |||| | | || ||| | | Sbjct 318 CGACTACGCTTTTCAGCCTCGCCTTAGGGACCGACTAACCCTGCGTCGATTAACGTTGCG 377 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATT--CCCACCCGTCACACGCTACTCATGCC 118 | |||| |||||| |||||| | | || | ||||| | || |||||||| | Sbjct 378 CAGGAAACCTTGGTCTTTCGGCGTGGGTGTTTTTCACACCCATTGT-CGTTACTCATGTC 436 Query 119 TGCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACA 176 |||||| |||| | || | ||||| || | || | || |||||| || ||| Sbjct 437 AGCATTCGCACTTCTGAT-ACCTCCAGCAAGCT-TCTCAACTCACCTTCACAGGCTTACA 494 Query 177 CGACGCTCCCCTACCCAACCACACAGGTTG---CCACAGCTTCGGCGGATAACTTAAGCC 233 ||||||| ||||| | ||| | || || |||||||| | || || |||| Sbjct 495 GAACGCTCCTCTACCGCATCACTTACGTGATACCCGTAGCTTCGGTGTATGGTTTGAGCC 554 Query 234 CCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA 293 ||| ||||| || |||| | ||| ||| ||||||||||||||| ||||| |||| Sbjct 555 CCGTTACATCTTCCGCGCAGGCCGACTCGACTAGTGAGCTATTACGCTTTCTTTAAAGGG 614 Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGC 329 |||||||||| ||||||||||||| | |||||| || Sbjct 615 TGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTAAGC 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177296697344