Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq7165 224 2e-56 seq11516 93.3 7e-17 >seq7165 Length=718 Score = 224 bits (248), Expect = 2e-56 Identities = 184/224 (82%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| |||| ||| ||||| ||| || |||| |||| Sbjct 495 GCTTAGATGCTTTCAGCGGTTATCTATTCCGAACATAGCTACCCGGCAATGCCACTGGCG 554 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| || ||||||||||| ||||| ||||||||||||||||| | |||| ||| Sbjct 555 TGACAACCGGAACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCT 614 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||||| || ||| ||||| | |||||||||||||||||||| ||||||||| ||||| Sbjct 615 CTCAAATCTCAAACGTCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCC 674 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGA 239 ||||||||| || |||||| ||||||||||| |||||||||| Sbjct 675 AGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGA 718 >seq11516 Length=530 Score = 93.3 bits (102), Expect = 7e-17 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||| ||||||||||||||| |||||||||||||||||||| ||| | ||||||| ||| Sbjct 441 GATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTATCGCTTTAATAGGC 500 Query 220 GAACAGCCCAACCCTT 235 |||||| | |||||| Sbjct 501 GAACAGACTTACCCTT 516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780605181616