Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq20336 95.1 2e-17 >seq20336 Length=353 Score = 95.1 bits (104), Expect = 2e-17 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296 |||||||| |||||||||||| |||| ||||||||||||||||||||| | |||| Sbjct 195 GGGATAGATTATTGCAATTATTAATCTTGAACGAGGAATGCCTAGTAAGCATGATTCATT 254 Query 297 AGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || | | ||| ||||||||||||||||||| Sbjct 255 AGATTGTGCTGACTACGTCCCTGCCCTTTGTA 286 Score = 78.8 bits (86), Expect = 2e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 |||||||| |||||| ||||||||||||||| |||||||| || ||| ||||||| || Sbjct 1 GGAAGTTTAAGGCAACAACAGGTCTGTGATGTCCTTAGATAAACTAGGCTGCACGCGTGC 60 Query 163 TACACTGA 170 |||| ||| Sbjct 61 TACAATGA 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946956039168