Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq22865 280 5e-73 seq8261 86.0 2e-14 >seq22865 Length=324 Score = 280 bits (310), Expect = 5e-73 Identities = 217/258 (84%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 27 TGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACG 86 |||| ||||||||||||| | |||||| |||||| |||| ||||||| |||||||| Sbjct 1 TGGGAATAGACCCGAAACCGGGCGATCTATCCATGGGCAGGTTGAAGGTTGGGTAACACT 60 Query 87 CCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTG 146 ||||||| ||||||| |||| |||||||| |||| |||||| |||||| | || ||| Sbjct 61 AACTGGAGGACCGAACCGACTACCGTTGAAAAGTTAGCGGATGACCTGTGGATCGGAGTG 120 Query 147 AAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTC 206 ||||||||| ||| || ||| ||||||||||||| ||||| |||||||||||| ||||| Sbjct 121 AAAGGCTAATCAAGCTCGGAGATAGCTGGTTCTCCTCGAAAGCTATTTAGGTAGCGCCTC 180 Query 207 AAGTATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAA 266 | ||||||| | ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 181 ATGTATCACTGTAGGGGGTAGAGCACTGTTTCGGCTAGGGGGTCATCCCGACTTACCAAA 240 Query 267 CCATTGCAAACTCCGAAT 284 || |||||||||||||| Sbjct 241 CCGATGCAAACTCCGAAT 258 >seq8261 Length=657 Score = 86.0 bits (94), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 409 GCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGC 468 ||| |||||||||||| |||||||| |||||||||| | |||||||| |||||| ||| Sbjct 650 GCTTAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGC 592 Query 469 TCACTAGTCGAG 480 |||||||||||| Sbjct 591 TCACTAGTCGAG 580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689164826624