Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq22237 159 1e-36 seq8 93.3 1e-16 >seq22237 Length=330 Score = 159 bits (176), Expect = 1e-36 Identities = 236/327 (72%), Gaps = 8/327 (2%) Strand=Plus/Minus Query 54 GATTGCCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACC 113 |||| || ||| | ||||| | ||||| | | |||||||||| ||| ||||| | || Sbjct 323 GATTTCCGACCGGTCTGAGCGCACCTTCGTACTCCTCCGTTACTCTTTAGGAGGAGA-CC 265 Query 114 GCCCCAGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGA 173 |||||||| ||||||||||||| |||||||| | | || ||| | || || |||||| Sbjct 264 GCCCCAGTCAAACTACCCACCATACACTGTCCTCGATCCGGATAACGGACCTGAGTTAGA 205 Query 174 TATCCACTACGGT--CAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCG 231 || | | | | ||| |||||||||||| | |||||| ||| |||| || Sbjct 204 A--CCTCAAAGTTGCCAGGGTGGTATTTCAAGGTTGGCTCCACGCGAACTGGCGTCCACG 147 Query 232 CATCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGT 291 | ||| || |||||||||||||||||||| | | || ||| | | |||||||||| Sbjct 146 CTTCAAAGCCTCCCACCTATCCTACACAAGCAAATTCAAAGTCCAGTGCAAAGCTATAGT 87 Query 292 GAAGG-TCCCGGGGTCTTTTCGTCCTGCCGCGCGAAAC-GAGCATCTTTACTCGTACTGC 349 |||| || |||||||||| |||| |||||| || || ||||||| || | | | Sbjct 86 AAAGGTTCACGGGGTCTTTCCGTCTAGCCGCG-GATACACTGCATCTTCACAGCGATTTC 28 Query 350 AATTTCACCGGGCCTGTGGTTGAGACA 376 |||||||| | | || ||| |||||| Sbjct 27 AATTTCACTGAGTCTCGGGTGGAGACA 1 >seq8 Length=4933 Score = 93.3 bits (102), Expect = 1e-16 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 373 GACANNNGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 432 |||| ||| ||||||||| || ||| |||||| |||| |||||||||||||||||| Sbjct 28 GACAATGGGGAAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTT 87 Query 433 GCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 |||||||||||| ||| | ||| |||||||||| Sbjct 88 GCTACCTTAGGACCGTTTAAAATACAGCCGCCGTTTA 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701961529856