Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F000576715.1_202014-02-03] 25,756 sequences; 16,303,117 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq15732 158 3e-36 >seq15732 Length=427 Score = 158 bits (174), Expect = 3e-36 Identities = 177/234 (76%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCA-----TAAGGTACATACAAGCTCCCA 55 |||||||||||| |||||||||| ||||||||| ||| || | |||| | | | Sbjct 195 GGCTGCTGGCACAGAGTTAGCCGGTGCTTATTCTGTCGGTAACGTCAAAACAATCACGTA 254 Query 56 C-ACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | || | || |||| | |||| ||||||||||| ||| ||||| || Sbjct 255 TTAGGTAACTGCCCTTCCTCCCAACTTAAAGTGCTTTACAATCCGAAGA-CCTTCTTCAC 313 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | ||||||| |||| || ||| |||||| |||||||||| |||||||||||| Sbjct 314 ACACGCGGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 373 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228 |||||||||| |||||||||||||||||||| |||| || | |||||||||| Sbjct 374 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGA 427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068524719872