Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F001602025.1_202016-04-08] 833 sequences; 20,385,537 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq12 113 7e-23 >seq12 Length=1108057 Score = 113 bits (124), Expect = 7e-23 Identities = 89/104 (86%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||| | | | || ||||| || |||||||||| ||| | Sbjct 830798 GTACAAAGGGCAGGGACGTAGTCAGCACAATCT-GATGAATCATGCTTACTAGGCATT-C 830741 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT 104 |||||| |||| || ||||||||| |||||||||||||||||| Sbjct 830740 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCCATCACGAT 830697 Score = 86.0 bits (94), Expect = 9e-15 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 147 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 206 ||| ||| ||| |||| |||||| ||||||| ||| || |||||||| ||||||||| Sbjct 830593 ACTTGTTATATATATCATTGTAGCACGCGTGCAGCCTAGTTTATCTAAGGACATCACAGA 830534 Query 207 CCTGTTATTGCCTCAAACTTCCGTG 231 |||||| |||||| |||||||| || Sbjct 830533 CCTGTTGTTGCCTTAAACTTCCTTG 830509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751993931595