Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F001602025.1_202016-04-08] 833 sequences; 20,385,537 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq12 109 1e-21 >seq12 Length=1108057 Score = 109 bits (120), Expect = 1e-21 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260 || || | ||||||| | || | | ||||| |||||||||| |||||||||||| Sbjct 830670 AAAGTATAGGTAATCCAATCAATATATATCGTGATGGGGATAGATTATTGCAATTATTAA 830729 Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320 |||| ||||||||||||||||||||| | ||||||| | | ||| ||||||||||| Sbjct 830730 TCTTGAACGAGGAATGCCTAGTAAGCATGATTCATCAGATTGTGCTGACTACGTCCCTGC 830789 Query 321 CCTTTGTA 328 |||||||| Sbjct 830790 CCTTTGTA 830797 Score = 80.6 bits (88), Expect = 5e-13 Identities = 79/101 (78%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || | | || | | | |||||||| |||||| ||||||||||| Sbjct 830479 GCTTCTTAGAGGAACATTGTGTATCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 830538 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||| |||||||| || ||| ||||||| |||||| ||| Sbjct 830539 GATGTCCTTAGATAAACTAGGCTGCACGCGTGCTACAATGA 830579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947192109824