Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F001602025.1_202016-04-08] 833 sequences; 20,385,537 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq12 203 1e-49 >seq12 Length=1108057 Score = 203 bits (224), Expect = 1e-49 Identities = 163/194 (84%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 35 TGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGC 94 ||||| ||||| ||||||||||||| | || | |||||||||||| ||||||||| Sbjct 829278 TGTATTGTTATTTCTTGTCACTACCTCTCTTCTTCAGAATTGGGTAATTTACGCGCCTGC 829219 Query 95 TGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATT 154 |||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 829218 TGCCTTCCTTAGATGTGGTAGCTATTTCTCAGGCTCCCTCTCCGGAATCGAACTCTAATT 829159 Query 155 CCCCGTTACCCGTTGATA-CCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGC 213 |||||||||||| | ||| ||||| |||| || || |||| |||| |||| ||||||| | Sbjct 829158 CCCCGTTACCCG-TCATAGCCATGTTAGGTCAATACCCTAACATCAAAAGCTGATAGGTC 829100 Query 214 AGAAATTTGAATGA 227 ||| | | || ||| Sbjct 829099 AGATACTCGATTGA 829086 Score = 107 bits (118), Expect = 6e-21 Identities = 128/169 (76%), Gaps = 6/169 (4%) Strand=Plus/Minus Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAA 397 |||||| || ||||||||| || || || ||||||| | || || | | |||| Sbjct 828955 TTTTTA-CAAGTATTAGCTACAGCTTTTCCGTAGTTATCCTTATAATATA--AATGTCAA 828899 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT-TGCTTAT--A 454 || | ||||||| ||||||||||| ||||||||||| | ||| | | | | | | Sbjct 828898 GTAGATTATAACTGTTTTAATGAGCCGTTCGCAGTTTCGATATATTATTATACATGTGTA 828839 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 ||| || ||||||||||||||||| ||||||||||||||||||||||| Sbjct 828838 CTTTCACTTGCATGGCTTAATCTTTAAGACAAGCATATGACTACTGGCA 828790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510387418368