Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gaboni_20[genbank_20GCA_5F001602025.1_202016-04-08] 833 sequences; 20,385,537 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6 105 5e-18 >seq6 Length=2947581 Score = 105 bits (116), Expect = 5e-18 Identities = 207/306 (68%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321 |||||||||| ||| | || |||||| | | ||||||||| || | ||||| Sbjct 1354414 TTCACCCCATGTTTCACTTAAACCTGGACATTCATTTGGACACATTAGGGTCCAATTTTT 1354473 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 || | || || | |||||| |||||||| | ||| | || || || | ||| || Sbjct 1354474 ATTTTCTTTAACTCTCTTCATAAAAAGATCAGGAACCCATACAGCATAAAATAAATCTCG 1354533 Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441 ||||| | || || | || |||||||| | || || | || ||||| || || | Sbjct 1354534 TGCTCTTAATTCTTCTTTTCCATGATTTTTCCTTAAATCTAAAAATTCAAATATATCTGA 1354593 Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501 |||||||||||| | || | || || || || ||||||| || |||||||| || || Sbjct 1354594 ATGCCATGGTTCAATATAAACAGCAAAAGATCCTTTACGTTTTCCTCCACCTTGATCTAC 1354653 Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561 || | || | || || || | ||||| ||||| | || |||||| | ||||| Sbjct 1354654 ATATCTTGCAGTGTCATTAAAAACTCTTAACATAGGTACTAAACCATTAGATATTCCATT 1354713 Query 66562 GGTGCC 66567 ||| || Sbjct 1354714 GGTACC 1354719 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 65480 GGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCG 65539 ||||||||||||||| | || || |||||||| | |||||||||||||||||| || || Sbjct 1353647 GGTTCAAAGGATTCATTATTTCCAAGAATTTGTGAAGTAGATGCAGTTGGCATAGGTGCT 1353706 Query 65540 ACCAACAATGAGTTTC 65555 | || |||||||||| Sbjct 1353707 AATAATAATGAGTTTC 1353722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563963815120