Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3 120 6e-25 seq10 86.0 1e-14 >seq3 Length=1051854 Score = 120 bits (132), Expect = 6e-25 Identities = 186/264 (70%), Gaps = 19/264 (7%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG---------GCCTTTGCTC-----GA 118 ||||||||||| |||||||||||||||||||| || ||| || || Sbjct 971706 TTTTACTTTGAGTAAATTAGAGTGTTCAAAGCAAACAGATATAGCATTTACTGCGTTTGA 971765 Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGG---TTCTATTTTGTTGGTTTCTAG 175 |||| |||||||||||||| ||| | || | || | |||| || ||| | Sbjct 971766 ATACTACAGCATGGAATAATAAAATTGAACAAGTCAAAATTTTGTTTTTTTTTTTTATTT 971825 Query 176 GACCGCCGTAATGATTAATAGGGATAG-TCGGGGGTGTCAGTATTCAATTGTCAGAGGTG 234 | || | |||||||||| ||| | ||||| | ||||||| ||||||||||| Sbjct 971826 TGGCTTAGTTACGATTAATAGGAGTAGCTTGGGGGCATTTGTATTCAGATGTCAGAGGTG 971885 Query 235 AAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCAT 294 |||||||| ||||| || |||| ||| ||||||||||| || || | || || ||| Sbjct 971886 AAATTCTTAGATTTTCTGGAGACAAACAACTGCGAAAGCATTTGCCTAAAATACTTCCAT 971945 Query 295 TAATCAGTGAACGAAAGTTAGGGG 318 |||||| |||||||||||| ||| Sbjct 971946 TAATCA-AGAACGAAAGTTAAGGG 971968 >seq10 Length=1488461 Score = 86.0 bits (94), Expect = 1e-14 Identities = 155/224 (69%), Gaps = 26/224 (12%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAG---------GCCTTTGCTC-----GAAT 120 ||||||||| |||||||||||||||||||| || ||| || |||| Sbjct 237 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAAACAGATATAGCATTTACTGCGTTTGAAT 178 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTA--TTTTGTTGGTTTCTAGGAC 178 || |||||||||||| | ||| | || | || | ||||||| ||| | | Sbjct 177 ACTACAGCATGGAATAACAAAATTGAACAAG----TCAAAATTTTGTTTTTTTTTCTTAT 122 Query 179 C---GCC--GTAATGATTAATAGGGATAG-TCGGGGGTGTCAGTATTCAATTGTCAGAGG 232 || || | |||||||||| ||| | ||||| | ||||||| ||||||||| Sbjct 121 TTTTGCTTAGTTACGATTAATAGGAGTAGCTTGGGGGCATTTGTATTCAGATGTCAGAGG 62 Query 233 TGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 |||||||||| ||||| || |||| ||| ||||||||||| || Sbjct 61 TGAAATTCTTAGATTTTCTGGAGACAAACAACTGCGAAAGCATT 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915193200064