Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3 113 9e-23 >seq3 Length=1051854 Score = 113 bits (124), Expect = 9e-23 Identities = 103/129 (80%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 201 AAGGTCTGGGTAATCTTGTTAAACTC-TGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 || || | ||||||||| | || | | ||||| |||||||||| |||||||||||| Sbjct 972718 AAAGTGTAGGTAATCTTTATCAATACATATCGTGATGGGGATAGATTATTGCAATTATTA 972777 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||| ||||||||||||||||||||| | ||||||| | | ||| |||||||||| Sbjct 972778 ATCTTGAACGAGGAATGCCTAGTAAGCATGATTCATCAGATTGTGCTGACTACGTCCCTG 972837 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 972838 CCCTTTGTA 972846 Score = 93.3 bits (102), Expect = 8e-17 Identities = 82/101 (81%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||| || || | || | | | |||||||| |||||| ||||||||||| Sbjct 972530 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 972589 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||| ||||||||| || ||| ||||||| |||||||||| Sbjct 972590 GATGTCCTTAGATGAACTAGGCTGCACGCGTGCTACACTGA 972630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947192962304