Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17]
743 sequences; 33,006,272 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 9e-23
>seq3
Length=1051854
Score = 113 bits (124), Expect = 9e-23
Identities = 103/129 (80%), Gaps = 1/129 (1%)
Strand=Plus/Plus
Query 201 AAGGTCTGGGTAATCTTGTTAAACTC-TGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|| || | ||||||||| | || | | ||||| |||||||||| ||||||||||||
Sbjct 972718 AAAGTGTAGGTAATCTTTATCAATACATATCGTGATGGGGATAGATTATTGCAATTATTA 972777
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||| ||||||||||||||||||||| | ||||||| | | ||| ||||||||||
Sbjct 972778 ATCTTGAACGAGGAATGCCTAGTAAGCATGATTCATCAGATTGTGCTGACTACGTCCCTG 972837
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 972838 CCCTTTGTA 972846
Score = 93.3 bits (102), Expect = 8e-17
Identities = 82/101 (81%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129
|||||||||||| || || | || | | | |||||||| |||||| |||||||||||
Sbjct 972530 GCTTCTTAGAGGAACGATGTGTGTCTAACACAAGGAAGTTTAAGGCAACAACAGGTCTGT 972589
Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170
|||| ||||||||| || ||| ||||||| ||||||||||
Sbjct 972590 GATGTCCTTAGATGAACTAGGCTGCACGCGTGCTACACTGA 972630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947192962304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |