Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20gonderi_20[genbank_20GCA_5F002157705.1_202017-05-17] 743 sequences; 33,006,272 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq13 105 5e-18 >seq13 Length=2538962 Score = 105 bits (116), Expect = 5e-18 Identities = 207/306 (68%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 66262 TTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACC 66321 |||||||||| |||| | | |||||||| | ||||||||| | | ||||| Sbjct 814840 TTCACCCCATGTTTCGCTTAACCCTGGACACTCATTTGGACACATTAAAGTCCAATTTTT 814781 Query 66322 ATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCG 66381 || | || || | |||||| ||||| || | ||| | || ||||| ||||| || Sbjct 814780 ATTTTCTTTAACTCTTTTCATAAAAAGATCTGGAACCCACACAGCATAGAAAAGATCTCG 814721 Query 66382 TGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGC 66441 |||| | || || | || |||||||| | || || | || ||||| ||||| | Sbjct 814720 AGCTCTTAATTCTTCTTTTCCATGATTTTTTCTTAAATCTAAAAATTCAAAAATGTCAGA 814661 Query 66442 ATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501 |||||||||||| | ||| | || || || || | | ||| || || ||||| || || Sbjct 814660 ATGCCATGGTTCAATGTATACAGCAAAAGATCCTTTTCTTTTCCCTCCTCCTTGATCTAC 814601 Query 66502 GTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATT 66561 || | ||| || ||||| || | | ||| ||||| | ||||| ||| | ||||| Sbjct 814600 ATATCTAGCAGTATCATTGAATACTCTTAGCATAGGTACTAATCCGTTGGATATTCCATT 814541 Query 66562 GGTGCC 66567 || || Sbjct 814540 CGTTCC 814535 Score = 82.4 bits (90), Expect = 6e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 65480 GGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCG 65539 ||||||||||||||| | || || |||||||| | |||||||||||||||||| ||||| Sbjct 815607 GGTTCAAAGGATTCATTATTTCCCAGAATTTGCGAAGTAGATGCAGTTGGCATTGGAGCC 815548 Query 65540 ACCAACAATGAGTTTCGCAATCC 65562 | | ||||| || | |||||| Sbjct 815547 AGAAGTAATGAATTCCTCAATCC 815525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564399897520