Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20knowlesi_20[genbank_20GCA_5F002140095.1_202017-05-15] 28 sequences; 24,771,595 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq26 84.2 1e-14 seq21 84.2 1e-14 seq23 78.8 5e-13 >seq26 Length=1556943 Score = 84.2 bits (92), Expect = 1e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 92677 CCTAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 92727 >seq21 Length=1079809 Score = 84.2 bits (92), Expect = 1e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 979170 CCTAGTCGGCATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 979120 >seq23 Length=1360573 Score = 78.8 bits (86), Expect = 5e-13 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 65 CCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 ||||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct 109499 CCTAGTCGGTATAGTTTATGGTTAAGATTACGACGGTATCTGATCGTCTTC 109549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399926920