Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4752 96.9 6e-18 >seq4752 Length=4367 Score = 96.9 bits (106), Expect = 6e-18 Identities = 101/130 (78%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||| || ||||| | |||||||| | |||||||||||||| ||||| Sbjct 3292 ATTAATAGGAGTATCGGGGGGCATTAGTATTCAGAAGGAAGAGGTGAAATTCTAAGATTT 3233 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 ||| ||||||| |||||||| || || |||| ||| ||||||||||||| |||||| Sbjct 3232 TCTGAGGACTAACGACTGCGAATGCATTTGCCAATGATATTTTCATTAATCA-AGAACGA 3174 Query 309 AAGTT-AGGG 317 | ||| |||| Sbjct 3173 AGGTTGAGGG 3164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915133464960