Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1787 122 2e-25 seq1788 98.7 3e-18 >seq1787 Length=5333 Score = 122 bits (134), Expect = 2e-25 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| |||||||||| |||| |||||| | || | | ||||||| ||| Sbjct 1035 CTGTATCTTCACAGATATTTTTATTTCATTAAGATTTTTTTCAAGACAGCATTTAAGTCG 1094 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| | ||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1095 TTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGT 1154 Query 131 TATTGTTACGGCCGCCGTTTAC 152 ||| | ||| |||||||||||| Sbjct 1155 TATAGATACAGCCGCCGTTTAC 1176 >seq1788 Length=6067 Score = 98.7 bits (108), Expect = 3e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| || ||| |||||| |||| |||||||||||||||||| ||||||||||||| Sbjct 2259 TCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGAC 2318 Query 128 CGTTATTGTTACGGCCGCCGTTTA 151 |||| | ||| ||||||||||| Sbjct 2319 CGTTTACGATACAGCCGCCGTTTA 2342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260708339840