Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1787 143 6e-32 seq1788 95.1 3e-17 >seq1787 Length=5333 Score = 143 bits (158), Expect = 6e-32 Identities = 218/308 (71%), Gaps = 8/308 (3%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| | Sbjct 1089 AAGTCGTTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTG 1148 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTA-AGTTCACTGCTTCGATTGCTCT 177 ||||||||||| ||| ||||||||||||| ||||| | | | | ||| | Sbjct 1149 GACCGTTATAGATACAGCCGCCGTTTACTATAGCTTATATATATATTATAATATTAAATT 1208 Query 178 A-ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236 | | | || || || | ||||| |||||| |||| |||||||| | || | Sbjct 1209 ACATATATTATTTTTACATAATAGCACTGGGCAGATGTCAATCTTTATACATCATTTTTC 1268 Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTG 296 | |||||| | | |||||||||| ||||||||||||| |||| | | | | Sbjct 1269 AATTTAGCAAAGATTTGTGTTTTTGTTAAACAGTCGCTTAAATTTATTATTTTCAAC--- 1325 Query 297 TCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAA 356 || | | | | | || |||||||||||| | | | |||||| |||||||||| || Sbjct 1326 ---TAAATAAGTATCTTTTATCCCTAAGTTACAAGATAAATTTGCCTAGTTCCTTAAAAA 1382 Query 357 TAGTTCTC 364 | || || Sbjct 1383 AAATTATC 1390 >seq1788 Length=6067 Score = 95.1 bits (104), Expect = 3e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| || ||| ||| || |||| |||||||||||||||||| |||||||||| Sbjct 2256 AAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAG 2315 Query 119 GACCGTTATAGTTACGGCCGCCGTTTA 145 ||||||| | ||| ||||||||||| Sbjct 2316 GACCGTTTACGATACAGCCGCCGTTTA 2342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062322763520