Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2886 291 1e-76 seq1896 228 1e-57 >seq2886 Length=3689 Score = 291 bits (322), Expect = 1e-76 Identities = 188/206 (91%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2306 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 2247 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| || |||||| || ||||||||||||||||| Sbjct 2246 TTAGCGGGTGAACAATCCGACACTTTGAGACTTCTGCGTCCCAATGATAGGAAGAGCCGA 2187 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||| || |||||||| |||||||||||||||||| Sbjct 2186 CATCGAAGGATCAAAAAGCTACGTCGCTAGGAGCGCTTGGCAGCCACAAGCCAGTTATCC 2127 Query 211 CTGTGGTAACTTTTCTGGCACCTCTA 236 ||||||||||||||| | |||||||| Sbjct 2126 CTGTGGTAACTTTTCAGACACCTCTA 2101 >seq1896 Length=8495 Score = 228 bits (252), Expect = 1e-57 Identities = 167/194 (86%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||| Sbjct 3549 TCATCAGTAGGGTAAAACTAACCTATCTCACGAAGGTCTAAACCCAGCTTACGTTCCCTA 3490 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| || |||||| || |||||||||| ||| || Sbjct 3489 TTAGCGGGTGAACAATCCGACACTTTGAGACTTCTGCGTCCCAATGATAGGAAAAGCTGA 3430 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||| |||||||||| ||||||||| || |||| ||| ||||||||| |||||||| Sbjct 3429 TATCGAAGAATCAAAAAGCTACGTCGCTAGGAGCGCTCGGCAGCCACAAGCTAGTTATCC 3370 Query 211 CTGTGGTAACTTTT 224 |||| | ||||||| Sbjct 3369 CTGTAGAAACTTTT 3356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854337885120