Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20malariae_20[genbank_20GCA_5F900088575.1_202016-06-16] 7,270 sequences; 31,925,186 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1787 118 4e-24 seq1788 91.5 5e-16 >seq1787 Length=5333 Score = 118 bits (130), Expect = 4e-24 Identities = 86/100 (86%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 372 AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 431 |||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||| Sbjct 1078 AGACAGCATTTAAGTCGTTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTT 1137 Query 432 CGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471 ||||||||| ||| ||||||| ||| |||||||||||| Sbjct 1138 CGCTACCTTTGGACCGTTATAGATACAGCCGCCGTTTACT 1177 >seq1788 Length=6067 Score = 91.5 bits (100), Expect = 5e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 380 GGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 439 ||| ||||||||| || ||| |||||| |||| |||||||||||||||||| ||||||| Sbjct 2253 GGGAAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCT 2312 Query 440 TAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||| ||| | ||| |||||||||| Sbjct 2313 TAGGACCGTTTACGATACAGCCGCCGTTTA 2342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702276235520