Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088555.1_202016- 06-16] 4,025 sequences; 34,518,662 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq895 147 5e-33 seq896 95.1 3e-17 >seq895 Length=5594 Score = 147 bits (162), Expect = 5e-33 Identities = 223/313 (71%), Gaps = 17/313 (5%) Strand=Plus/Minus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| | Sbjct 4194 AAGTCGTTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTG 4135 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CTGCTTCGAT-TG 173 ||||||||||| ||| ||||||||||||| ||||| | || | || || | Sbjct 4134 GACCGTTATAGATACAGCCGCCGTTTACTATAGCTTATATACATATTATAATTTTATATT 4075 Query 174 CTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCT 233 | || | || || || | ||||| |||||| |||| |||||||| | | Sbjct 4074 ATATATAATAT---TTTTACATAATAGCACTGGGCAGATGTCAATCTTTATACATCATTT 4018 Query 234 TGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC 293 | | | |||||| | | |||||||||| |||||||||||| | ||||| | Sbjct 4017 TTCAATTTAGCAAAGATTTGTGTTTTTGTTAAACAGTCGCT----CAAATTCTTT---TA 3965 Query 294 CTGTCA--TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 | ||| || | | | | | || |||||||||||| | | | ||||||||||||||| Sbjct 3964 TTTTCAACTAAATAAGTATCTTTTATCCCTAAGTTACAAGATAAATTTGCCGAGTTCCTT 3905 Query 352 AACAATAGTTCTC 364 || || | || || Sbjct 3904 AAAAAAAATTATC 3892 >seq896 Length=6273 Score = 95.1 bits (104), Expect = 3e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || ||||||| || ||| ||| || |||| |||||||||||||||||| |||||||||| Sbjct 5092 AAGTCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAG 5151 Query 119 GACCGTTATAGTTACGGCCGCCGTTTA 145 ||||||| | ||| ||||||||||| Sbjct 5152 GACCGTTTACGATACAGCCGCCGTTTA 5178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062357238400