Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088565.1_202016- 06-16] 2,227 sequences; 38,010,039 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq2188 122 2e-25 seq679 98.7 3e-18 >seq2188 Length=13942 Score = 122 bits (134), Expect = 2e-25 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 |||||||||||||| | || |||||| | || | | ||||||| ||| Sbjct 13479 CTGCATCTTCACAGATAATTTTATTTCATTAAGATTTTTTTTAAGACAGCATTTAAGTCG 13420 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| | ||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 13419 TTACATCTTTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGT 13360 Query 131 TATTGTTACGGCCGCCGTTTAC 152 ||| | ||| |||||||||||| Sbjct 13359 TATAGATACAGCCGCCGTTTAC 13338 >seq679 Length=6273 Score = 98.7 bits (108), Expect = 3e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| || ||| |||||| |||| |||||||||||||||||| ||||||||||||| Sbjct 5095 TCGTTACACCGTTCATGCAGGACGGAGATTACCCGACAAGGAATTTTGCTACCTTAGGAC 5154 Query 128 CGTTATTGTTACGGCCGCCGTTTA 151 |||| | ||| ||||||||||| Sbjct 5155 CGTTTACGATACAGCCGCCGTTTA 5178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260771921984