Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20curtisi_20[genbank_20GCA_5F900088565.1_202016- 06-16] 2,227 sequences; 38,010,039 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq677 114 2e-23 seq676 114 2e-23 >seq677 Length=25099 Score = 114 bits (126), Expect = 2e-23 Identities = 95/116 (82%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||| ||||||||||||||| |||||||||||||||||||| ||| | ||||||| ||| Sbjct 147 GATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTATCGCTTTAATAGGC 88 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||| | |||||| || |||| | || ||||||| || ||||||||||| Sbjct 87 GAACAGACTTACCCTTAAAACATACTACTGCTTCAGGATGCGATAAGCCGACATCG 32 Score = 114 bits (126), Expect = 2e-23 Identities = 95/116 (82%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||| ||||||||||||||| |||||||||||||||||||| ||| | ||||||| ||| Sbjct 24959 GATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTATCGCTTTAATAGGC 25018 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||| | |||||| || |||| | || ||||||| || ||||||||||| Sbjct 25019 GAACAGACTTACCCTTAAAACATACTACTGCTTCAGGATGCGATAAGCCGACATCG 25074 >seq676 Length=16324 Score = 114 bits (126), Expect = 2e-23 Identities = 95/116 (82%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||| ||||||||||||||| |||||||||||||||||||| ||| | ||||||| ||| Sbjct 16091 GATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTATCGCTTTAATAGGC 16150 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||| | |||||| || |||| | ||| |||||| || ||||||||||| Sbjct 16151 GAACAGACTTACCCTTAAAACATACTACTGCCTTAGGATGCGATAAGCCGACATCG 16206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780783154972