Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088485.1_202016 -06-16] 1,914 sequences; 35,654,824 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1654 91.5 3e-16 >seq1654 Length=917 Score = 91.5 bits (100), Expect = 3e-16 Identities = 133/181 (73%), Gaps = 13/181 (7%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGC- 59 || |||| | ||||| |||||| || |||||| || | || ||||| | || ||||| Sbjct 707 TACCCCGGG-AGGGGAGTGAAAGAGTACCTGAAACCATGTGCATACAATCCGTTGGAGCT 765 Query 60 ----CGAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGT-C 114 | |||| |||||| |||||||||||| | ||||||||| |||||||| ||| Sbjct 766 CTTCCTTGTGAAG-GGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAG-CGTGG 823 Query 115 ACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGC 174 ||||||||||||| ||| ||| |||||| || ||||||||| | || ||||| Sbjct 824 TGTAGCGAGGTTAAGG---CGAGGGCCG-TAGCCGTAGCGAAAGCGAGTCCGAATAGGGC 879 Query 175 G 175 | Sbjct 880 G 880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972781380608