Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088485.1_202016 -06-16] 1,914 sequences; 35,654,824 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq910 109 1e-21 seq5 95.1 2e-17 >seq910 Length=1710 Score = 109 bits (120), Expect = 1e-21 Identities = 186/268 (69%), Gaps = 30/268 (11%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAG---------GCCTTT------GCTCGAA 119 ||||||||| |||||||||||||||||||| || ||| | | ||| Sbjct 1092 TTACTTTGAGTAAATTAGAGTGTTCAAAGCAAACAGTTAAAGCATTTTACTGCGTTTGAA 1033 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTG--------CGGTTCTATTTTGTTGGTTT 171 ||| |||||||||||| | ||| | || | | |||| |||| || ||| Sbjct 1032 TACTACAGCATGGAATAACAAAATTGAACAAGTCAAAACTCTGTTCCTTTTTCTTATTTT 973 Query 172 CTAGGACCGCCGTAATGATTAATAGGGATAG-TCGGGGGTGTCAGTATTCAATTGTCAGA 230 || | || | |||||||||| ||| | ||||| | ||||||| ||||||| Sbjct 972 ---GG--CTTAGTTACGATTAATAGGAGTAGCTTGGGGGCATTTGTATTCAGATGTCAGA 918 Query 231 GGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTT 290 |||||||||||| ||||| || |||| ||| ||||||||||| || || | || || Sbjct 917 GGTGAAATTCTTAGATTTTCTGGAGACAAACAACTGCGAAAGCATTTGCCTAAAATACTT 858 Query 291 TCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||| |||||||||||| ||| Sbjct 857 CCATTAATCA-AGAACGAAAGTTAAGGG 831 >seq5 Length=19578 Score = 95.1 bits (104), Expect = 2e-17 Identities = 184/269 (68%), Gaps = 27/269 (10%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC---------------CTTTGCTCG 117 |||||| |||| ||||||||||||| |||||| | || || | Sbjct 9770 TTTTACCTTGAGTAAATTAGAGTGTTTAAAGCAAACAGATACAACAGTTTACTGTGTTTA 9711 Query 118 AATACATTAGCATGGAATAATA-----GAAT-AG--GACGTGCGGTTCTATTTTGTTGGT 169 ||||| |||||||||||||| |||| || ||||| | ||| || | ||| | Sbjct 9710 AATACTACAGCATGGAATAATAATATCGAATGAGCCGACGTACTTTTCGTTTCT-TTGTT 9652 Query 170 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAG 229 | | || | || | |||||| ||| ||||| ||||| | ||||||| ||| || Sbjct 9651 ATTTTGG--CTTAGTTACGATTAACAGGAATAGTTGGGGGCATTTGTATTCAGATGTTAG 9594 Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289 |||||||||||| |||| || |||| ||| | ||||||||| | | | || || Sbjct 9593 AGGTGAAATTCTAAGATTATCTGGAGACGAACAATTGCGAAAGCATCTGTCTAACATATT 9534 Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||| |||||||||||| ||| Sbjct 9533 TTCATTAATCA-AGAACGAAAGTTAAGGG 9506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915182483072