Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088485.1_202016 -06-16] 1,914 sequences; 35,654,824 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1654 389 1e-105 >seq1654 Length=917 Score = 389 bits (430), Expect = 1e-105 Identities = 275/314 (88%), Gaps = 7/314 (2%) Strand=Plus/Minus Query 287 GATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCG 346 ||||||| |||||||||||| ||| |||| ||||| |||||||||||||||||||||||| Sbjct 917 GATCACTCCGCTTCGGGTCTAGATGGTGCAACTCAAACGCCCTATTCGGACTCGCTTTCG 858 Query 347 CTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTT 406 |||||||||| | | || |||||||||| |||| |||| ||||||||||||||||||| Sbjct 857 CTACGGCTACGGCCCTCGCCTTAACCTCGCTACACCACGCTAACTCGCAGGCTCATTCTT 798 Query 407 CAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCA 466 |||||||||||| |||||| || |||| | |||||| |||||||||| ||| Sbjct 797 CAAAAGGCACGCTGTCACCCTTCAC----AAGGAAG---AGCTCCAACGGATTGTATGCA 745 Query 467 CATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGT 526 |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| Sbjct 744 CATGGTTTCAGGTACTCTTTCACTCCCCTCCCGGGGTACTTTTCACCTTTCCCTCACGGT 685 Query 527 ACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586 ||| ||||||||||||||| | ||||||||||||||||||||||||||||||| |||||| Sbjct 684 ACTAGTCCGCTATCGGTCATCGAGGAGTATTTAGGCTTAACGGGTGGTCCCGCTAGATTC 625 Query 587 ACACGAAATTTCAG 600 |||| |||||||| Sbjct 624 ACACCGAATTTCAG 611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817565211136