Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20ovale_20wallikeri_20[genbank_20GCA_5F900088485.1_202016 -06-16] 1,914 sequences; 35,654,824 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1654 163 7e-38 >seq1654 Length=917 Score = 163 bits (180), Expect = 7e-38 Identities = 214/290 (74%), Gaps = 6/290 (2%) Strand=Plus/Minus Query 135 ACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTG 194 |||||||| | |||||||||| ||||||| || | ||| | | | | || || Sbjct 881 ACGCCCTATTCGGACTCGCTTT-CGCTACGGCTACGGCCCTCGCCTTAACCTCGCTACAC 823 Query 195 AAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA-AAGT--GGGC 250 | ||| |||| | | |||| | ||||||| |||| ||||||| || ||| | || Sbjct 822 CACGCTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCTTCACAAGGAAGAGC 763 Query 251 TCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTT 310 ||| || | ||||| ||| | ||||||||| || ||||||||||||| ||||||| ||| Sbjct 762 TCCAACGGATTGTATGCACATGGTTTCAGGTACTCTTTCACTCCCCTC-CCGGGGTACTT 704 Query 311 TTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| ||||||||||||||||||||| | |||||||||| || ||||||||| ||| Sbjct 703 TTCACCTTTCCCTCACGGTACTAGTCCGCTATCGGTCATCGAGGAGTATTTAGGCTTAAC 644 Query 371 GGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || ||||||| | | ||||| || | |||| | | || || |||||| Sbjct 643 GGGTGGTCCCGCTAGATTCACACCGAATTTCAGGGGTTCGGTGTTACTCG 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241576235776